Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
16
snATAC-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
86
DNA binding
16
DNA accessibility
8
Transcription
Target of assay
92
histone
92
histone modification
58
broad histone mark
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
91
bam
68
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
9
tsv
Organism
112
Homo sapiens
Biosample type
93
tissue
17
primary cell
2
in vitro differentiated cells
Organ
36
blood vessel
36
vasculature
18
brain
15
heart
10
epithelium
9
pancreas
8
blood
8
bodily fluid
7
kidney
5
limb
5
liver
5
musculature of body
3
artery
Project
96
AMP
16
T1D
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
96
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
4
audit script error
4
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
112 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
ascending aorta
12
thoracic aorta
12
germinal matrix
10
temporal lobe
10
aorta
9
+ See 11 more…
primary cell
peripheral blood mononuclear cell
8
hepatocyte
5
kidney epithelial cell
4
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
Download