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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
total RNA-seq
82
single cell RNA-seq
77
ATAC-seq
41
WGBS
22
snATAC-seq
Assay category
228
Transcription
99
DNA accessibility
41
DNA methylation
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
188
bam
184
bigWig
164
tsv
134
zippedFastqFolder
74
fastq
38
bed narrowPeak
7
txt
1
bed bed3+
Organism
368
Homo sapiens
Biosample type
186
tissue
182
primary cell
Organ
261
pancreas
113
epithelium
40
liver
2
connective tissue
2
musculature of body
Project
234
AMP
134
HPAP
Genome assembly (visualization)
203
hg19
164
GRCh38
Lab
170
AMP-T2D consortium
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
1
audit script error
target.investigated_as!
narrow histone mark
month_released!
October, 2018
BIOSAMPLE
ASSAY
368 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
tissue
islet of Langerhans
126
18
liver
20
20
skeletal muscle tissue
1
1
primary cell
Langerhans cell
33
21
pancreatic alpha cell
7
22
25
pancreatic beta cell
9
13
16
pancreatic acinar cell
5
4
pancreatic delta cell
4
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