Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
total RNA-seq
96
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
186
Transcription
96
DNA accessibility
23
DNA binding
Target of assay
27
histone
27
histone modification
narrow histone mark
23
control
Date released
587
February, 2021
368
November, 2017
323
August, 2017
306
May, 2020
305
August, 2021
246
May, 2021
200
May, 2022
194
February, 2023
189
June, 2019
162
July, 2018
152
October, 2019
106
July, 2019
88
November, 2018
84
May, 2019
76
December, 2017
65
October, 2018
59
September, 2020
58
September, 2018
57
April, 2019
49
April, 2018
47
September, 2023
45
March, 2020
39
November, 2019
35
December, 2018
31
February, 2018
27
January, 2019
24
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
248
bam
225
bigWig
185
tsv
23
tagAlign
Organism
306
Homo sapiens
Biosample type
166
tissue
139
primary cell
1
cell line
Organ
167
liver
Project
265
AMP
41
T1D
Genome assembly (visualization)
225
hg19
184
GRCh38
Lab
265
AMP-T2D consortium
41
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
target.investigated_as!
narrow histone mark
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
306 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 22 more…
cell line
HepG2
1
See all biosamples
Download