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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
7
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
9
DNA binding
7
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
128
February, 2021
89
May, 2021
21
October, 2019
18
June, 2019
18
November, 2019
16
March, 2020
11
February, 2023
8
May, 2020
6
July, 2018
6
November, 2020
3
August, 2021
2
December, 2017
2
December, 2019
2
July, 2019
2
May, 2019
1
February, 2020
1
June, 2018
Available data
17
bam
14
bed narrowPeak
8
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
18
Homo sapiens
Biosample type
12
cell line
5
in vitro differentiated cells
1
tissue
Organ
12
epithelium
12
pancreas
1
adipose tissue
1
connective tissue
Project
18
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
9
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
tissue
adipose tissue(adipose white tissue)
1
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