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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
61
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
70
histone
70
histone modification
43
broad histone mark
narrow histone mark
16
control
7
transcription factor
RNA binding protein
Date released
715
February, 2021
331
November, 2017
330
May, 2021
315
August, 2017
314
May, 2020
307
August, 2021
205
February, 2023
203
June, 2019
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
81
May, 2019
74
December, 2017
67
November, 2018
61
March, 2020
59
September, 2020
58
September, 2018
56
November, 2019
54
October, 2018
53
April, 2019
49
April, 2018
47
September, 2023
33
December, 2018
31
February, 2018
25
February, 2020
21
January, 2019
21
October, 2017
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
107
bam
71
bed narrowPeak
65
bigWig
39
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
109
Homo sapiens
Biosample type
93
tissue
11
cell line
5
in vitro differentiated cells
Organ
50
pancreas
39
heart
14
kidney
11
epithelium
1
adipose tissue
1
connective tissue
Project
109
AMP
Genome assembly (visualization)
93
hg19
91
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
target.investigated_as!
narrow histone mark
RNA binding protein
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
23
kidney
14
heart right ventricle
9
heart
7
+ See 1 more…
cell line
EndoC_BH1
8
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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