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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
17
ChIP-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
27
Transcription
17
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
narrow histone mark
Date released
314
November, 2017
235
August, 2017
88
November, 2018
78
December, 2017
76
February, 2023
58
September, 2018
55
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
35
December, 2018
31
February, 2018
27
January, 2019
24
May, 2022
16
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
58
fastq
57
bam
57
bigWig
31
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
58
Homo sapiens
Biosample type
58
primary cell
Organ
57
pancreas
50
epithelium
Project
58
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
58
AMP-T2D consortium
Audit category:
17
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
58 results
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total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic beta cell
10
4
pancreatic ductal cell
4
6
4
pancreatic alpha cell
10
3
pancreatic acinar cell
2
4
3
pancreatic endocrine cell
7
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