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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
120
total RNA-seq
48
single cell RNA-seq
20
ChIP-seq
Assay category
187
DNA accessibility
168
Transcription
20
DNA binding
Target of assay
19
histone
19
histone modification
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
60
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
371
bam
363
bigWig
199
bed narrowPeak
199
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
164
tsv
50
fastq
Organism
375
Homo sapiens
Biosample type
283
tissue
92
primary cell
Organ
161
pancreas
80
kidney
51
epithelium
39
musculature of body
33
heart
32
limb
30
brain
18
ureter
16
connective tissue
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
375
AMP
Genome assembly (visualization)
363
GRCh38
340
hg19
Lab
375
AMP-T2D consortium
Audit category:
24
inconsistent ontology term
target.investigated_as!
narrow histone mark
organ_slims!
ovary
BIOSAMPLE
ASSAY
375 results
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Clear Filters
DNase-seq
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
5
pancreatic acinar cell
5
+ See 32 more…
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