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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
76
DNA binding
Target of assay
71
histone
71
histone modification
45
broad histone mark
narrow histone mark
22
control
9
transcription factor
5
RNA binding protein
Date released
36
May, 2019
30
October, 2019
6
February, 2021
4
November, 2017
Available data
76
bam
54
bigWig
50
bed narrowPeak
46
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
4
fastq
Organism
76
Homo sapiens
Biosample type
55
tissue
15
primary cell
6
cell line
Organ
492
liver
145
pancreas
120
connective tissue
101
brain
94
heart
80
epithelium
76
vasculature
74
blood vessel
61
adipose tissue
59
blood
59
bodily fluid
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
spleen
14
embryo
11
vein
2
eye
Project
76
AMP
Genome assembly (visualization)
54
hg19
50
GRCh38
Lab
76
AMP-T2D consortium
target.investigated_as!
narrow histone mark
organ_slims!
spleen
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
tissue
tibial artery
19
ascending aorta
12
thoracic aorta
12
aorta
9
coronary artery
3
primary cell
endothelial cell of umbilical vein
11
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
cell line
smooth muscle cell of the coronary artery
6
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