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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
56
DNA accessibility
49
DNA binding
Target of assay
65
histone
65
histone modification
41
broad histone mark
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
35
February, 2023
25
May, 2019
25
October, 2019
12
February, 2021
5
June, 2019
2
July, 2019
1
November, 2017
Available data
155
bam
126
bigWig
105
bed narrowPeak
68
tsv
55
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
105
Homo sapiens
Biosample type
82
tissue
12
cell line
11
primary cell
Organ
390
liver
168
kidney
155
pancreas
126
heart
108
vasculature
105
blood vessel
103
epithelium
97
brain
78
limb
68
artery
57
connective tissue
53
blood
53
bodily fluid
49
musculature of body
32
eye
19
nerve
18
ureter
12
spleen
11
adipose tissue
8
bone element
8
skeleton
8
vein
7
embryo
Project
105
AMP
Genome assembly (visualization)
104
GRCh38
69
hg19
Lab
105
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
1
36
2
tibial artery
14
1
2
ascending aorta
9
1
thoracic aorta
8
1
aorta
7
cell line
smooth muscle cell of the coronary artery
4
8
primary cell
endothelial cell of umbilical vein
5
2
1
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
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