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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
18
October, 2019
4
February, 2023
2
June, 2019
1
February, 2020
1
July, 2019
Available data
5
tsv
2
bam
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed narrowPeak
1
bigWig
Organism
26
Homo sapiens
Biosample type
23
tissue
3
primary cell
Organ
702
liver
700
pancreas
617
connective tissue
471
adipose tissue
352
epithelium
251
heart
176
kidney
152
vasculature
149
blood vessel
147
bone element
132
brain
86
artery
63
limb
59
blood
59
bodily fluid
48
musculature of body
32
nerve
29
embryo
26
eye
21
spleen
13
vein
10
lung
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
26
AMP-T2D consortium
target.investigated_as!
narrow histone mark
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
2
1
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