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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA methylation
Target of assay
2
histone
2
histone modification
narrow histone mark
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
251
pancreas
210
kidney
207
epithelium
141
heart
100
liver
93
bone element
75
connective tissue
52
eye
51
vasculature
50
blood vessel
39
artery
38
adipose tissue
32
musculature of body
31
brain
20
lung
9
blood
9
bodily fluid
8
skeleton
7
limb
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
28
hg19
Lab
52
AMP-T2D consortium
target.investigated_as!
narrow histone mark
files.file_type!
bam
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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