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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
6
total RNA-seq
3
DNase-seq
Assay category
16
DNA binding
6
Transcription
3
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
6
control
narrow histone mark
3
broad histone mark
Date released
130
August, 2021
80
June, 2019
47
September, 2023
25
October, 2019
15
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
4
May, 2019
3
December, 2019
2
March, 2020
Available data
23
bam
17
bigWig
11
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
15
cell line
8
primary cell
2
tissue
Organ
56
limb
37
blood vessel
37
vasculature
34
nerve
26
epithelium
25
kidney
22
artery
19
eye
15
pancreas
15
vein
12
brain
6
heart
5
liver
3
connective tissue
1
adipose tissue
1
pituitary gland
1
skin of body
Project
25
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
25
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
4
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
tissue
kidney
2
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