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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
8
ChIP-seq
2
ATAC-seq
Assay category
11
DNA accessibility
8
DNA binding
Target of assay
12
histone
12
histone modification
8
broad histone mark
narrow histone mark
Date released
8
August, 2017
4
June, 2019
3
October, 2019
2
November, 2018
1
March, 2019
1
October, 2017
Available data
656
bam
577
bigWig
423
fastq
422
tsv
174
bed narrowPeak
90
bigBed narrowPeak
80
zippedFastqFolder
25
bed bed3+
19
bed broadPeak
12
tagAlign
9
bigBed broadPeak
7
bedpe bed3+
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
15
Homo sapiens
Biosample type
18
tissue
1
cell line
Organ
78
kidney
57
liver
41
musculature of body
39
brain
36
limb
30
heart
20
epithelium
18
ureter
17
pancreas
15
vasculature
12
blood vessel
9
connective tissue
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
19
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
17
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
19 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
4
2
pancreas
2
4
body of pancreas
4
tibial nerve
2
cell line
Panc1
1
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