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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Target of assay
4
histone
4
histone modification
narrow histone mark
Date released
92
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
101
Homo sapiens
Biosample type
100
tissue
1
primary cell
Organ
557
liver
456
pancreas
319
epithelium
315
kidney
185
heart
173
connective tissue
143
brain
142
vasculature
137
blood vessel
101
bone element
100
limb
78
adipose tissue
77
artery
74
musculature of body
68
blood
68
bodily fluid
53
eye
30
nerve
22
spleen
19
lung
18
ureter
16
skeleton
16
vein
15
embryo
1
bone marrow
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
0
ovary
Project
100
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
100
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
target.investigated_as!
narrow histone mark
files.file_type!
tsv
BIOSAMPLE
ASSAY
101 results
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RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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