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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
20
DNase-seq
5
total RNA-seq
1
ATAC-seq
Assay category
27
DNA binding
21
DNA accessibility
5
Transcription
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
narrow histone mark
Date released
34
October, 2019
18
June, 2019
1
February, 2020
Available data
52
bam
41
bigWig
37
bed narrowPeak
36
bigBed narrowPeak
20
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
5
tsv
Organism
53
Homo sapiens
Biosample type
53
tissue
Organ
873
pancreas
731
liver
651
connective tissue
479
adipose tissue
475
epithelium
339
kidney
328
heart
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
41
GRCh38
41
hg19
Lab
53
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
27
2
5
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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