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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ChIP-seq
2
DNase-seq
1
RRBS
Assay category
2
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
narrow histone mark
1
transcription factor
Date released
2
June, 2019
2
November, 2017
1
July, 2019
Available data
4
bam
4
bigWig
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
2
bed bed3+
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
873
pancreas
731
liver
651
connective tissue
479
adipose tissue
475
epithelium
339
kidney
328
heart
210
vasculature
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
5
AMP
Genome assembly (visualization)
5
hg19
3
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
5 results
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Clear Filters
ChIP-seq
DNase-seq
RRBS
primary cell
choroid plexus epithelial cell
2
1
1
smooth muscle cell of the brain vasculature
1
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