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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
255
transcription factor
108
histone
108
histone modification
83
control
66
recombinant protein
59
broad histone mark
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
37
November, 2017
21
November, 2018
11
October, 2018
8
August, 2017
6
January, 2019
5
May, 2019
5
May, 2021
5
May, 2024
4
April, 2019
4
December, 2017
4
June, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
37
bam
37
fastq
36
bed narrowPeak
36
bigWig
35
bigBed narrowPeak
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
38
Homo sapiens
Biosample type
35
cell line
3
primary cell
Organ
35
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
38
AMP
Genome assembly (visualization)
35
hg19
31
GRCh38
Lab
37
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
cell line
HepG2
35
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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