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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
323
transcription factor
108
control
91
histone modification
90
histone
81
recombinant protein
narrow histone mark
52
RNA binding protein
36
broad histone mark
12
chromatin remodeller
2
other context
2
other post-translational modification
Date released
19
August, 2017
10
December, 2017
3
October, 2019
2
August, 2021
2
November, 2017
Available data
24
bed narrowPeak
24
bigWig
23
bam
19
fastq
16
bigBed narrowPeak
12
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
Organism
36
Homo sapiens
Biosample type
25
tissue
7
in vitro differentiated cells
3
cell line
1
primary cell
Organ
75
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
36
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
spleen
3
embryo
Project
36
AMP
Genome assembly (visualization)
24
hg19
23
GRCh38
Lab
35
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
inconsistent control read length
target.investigated_as!
narrow histone mark
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
36 results
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Clear Filters
ChIP-seq
tissue
liver
22
right lobe of liver
3
in vitro differentiated cells
hepatocyte
7
cell line
HepG2
3
primary cell
hepatocyte
1
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