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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
ChIP-seq
Assay category
143
DNA binding
Target of assay
315
histone
315
histone modification
narrow histone mark
143
broad histone mark
67
control
9
transcription factor
Date released
44
May, 2021
41
August, 2017
41
November, 2017
10
October, 2017
7
August, 2021
Available data
403
bigWig
396
bed narrowPeak
374
bam
238
bigBed narrowPeak
143
tagAlign
114
fastq
32
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
143
Homo sapiens
Biosample type
72
tissue
51
primary cell
14
in vitro differentiated cells
6
cell line
Organ
45
brain
18
liver
12
connective tissue
8
musculature of body
4
adipose tissue
4
pancreas
1
epithelium
Project
99
AMP
44
T1D
Genome assembly (visualization)
98
GRCh38
81
hg19
Lab
99
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
143 results
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ChIP-seq
tissue
liver
11
brain
10
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
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primary cell
monocyte
44
skeletal muscle myoblast
6
hepatocyte
1
in vitro differentiated cells
adipocyte
8
neural progenitor cell
6
cell line
HepG2
6
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