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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
CRISPR genome editing followed by DNA sequencing
3
MeRIP-seq
2
HiChIP
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
2
Transcription
Target of assay
3
control
nucleotide modification
Date released
5
February, 2023
3
November, 2020
2
March, 2023
Organism
8
Homo sapiens
Biosample type
564
primary cell
346
tissue
54
in vitro differentiated cells
10
cell line
2
stem cell
Organ
3
epithelium
3
pancreas
Project
5
T1D
3
AMP
2
community
Lab
AMP-T2D consortium
Bing Ren, UCSD
5
Kyle Gaulton, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
2
Anna Gloyn, Oxford
Audit category:
3
inconsistent ontology term
target.investigated_as!
nucleotide modification
lab.title!
Bing Ren, UCSD
AMP-T2D consortium
BIOSAMPLE
ASSAY
10 results
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CRISPR genome editing followed by DNA sequencing
MeRIP-seq
HiChIP
shRNA RNA-seq
siRNA RNA-seq
cell line
EndoC_BH1
3
3
2
EndoC-BH1
1
1
See all biosamples