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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1831
ChIP-seq
1441
total RNA-seq
482
ATAC-seq
278
single cell RNA-seq
212
DNase-seq
87
RNA microarray
57
pCHi-C
36
snATAC-seq
31
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
MeRIP-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Target of assay
5
control
nucleotide modification
Date released
5
November, 2020
Organism
5
Homo sapiens
Biosample type
3
cell line
2
tissue
Organ
5
pancreas
3
epithelium
Project
5
AMP
Lab
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
target.investigated_as!
nucleotide modification
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
5 results
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MeRIP-seq
cell line
EndoC_BH1
3
tissue
islet of Langerhans
2