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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
Assay category
23
DNA binding
Target of assay
304
transcription factor
80
control
73
recombinant protein
44
RNA binding protein
38
histone
38
histone modification
23
chromatin remodeller
19
broad histone mark
19
narrow histone mark
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
November, 2018
6
January, 2019
2
December, 2018
Available data
23
bam
23
bed narrowPeak
23
bigBed narrowPeak
23
bigWig
23
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
23
Homo sapiens
Biosample type
23
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
15
liver
8
blood
8
bodily fluid
Project
23
AMP
Genome assembly (visualization)
23
hg19
21
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
nucleotide modification
month_released!
November, 2018
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
cell line
HepG2
15
GM12878
8
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