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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
total RNA-seq
7
ChIP-seq
5
MeRIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
9
Transcription
7
DNA binding
2
DNA accessibility
Target of assay
6
control
6
histone
6
histone modification
nucleotide modification
4
broad histone mark
2
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
12
January, 2019
11
November, 2020
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
18
bam
16
bigWig
12
fastq
9
tsv
8
bed narrowPeak
7
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
23
Homo sapiens
Biosample type
9
tissue
8
cell line
6
primary cell
Organ
18
blood
bodily fluid
7
spleen
6
connective tissue
5
liver
5
pancreas
3
epithelium
Project
23
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
18
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
target.investigated_as!
nucleotide modification
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
23 results
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Clear Filters
total RNA-seq
ChIP-seq
MeRIP-seq
ATAC-seq
DNase-seq
tissue
spleen
7
islet of Langerhans
2
cell line
HepG2
5
EndoC_BH1
3
primary cell
osteoblast
4
1
1
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