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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
607
ChIP-seq
Assay category
607
DNA binding
Target of assay
608
histone modification
607
histone
314
narrow histone mark
293
broad histone mark
181
control
93
transcription factor
27
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
nucleotide modification
Date released
166
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
42
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
501
bigWig
499
bed narrowPeak
445
bam
294
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
601
Homo sapiens
Biosample type
607
tissue
227
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
95
heart
73
pancreas
69
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
605
AMP
2
T1D
Genome assembly (visualization)
473
GRCh38
417
hg19
Lab
572
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
target.investigated_as!
nucleotide modification
organ_slims!
kidney
BIOSAMPLE
ASSAY
607 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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