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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
6
ChIP-seq
Assay category
36
DNA accessibility
6
DNA binding
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
32
June, 2019
6
November, 2017
2
November, 2018
2
October, 2019
Available data
345
bam
307
bigWig
277
bed narrowPeak
152
bigBed narrowPeak
124
tagAlign
84
tsv
51
bed broadPeak
42
bigBed broadPeak
39
bed bed3+
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
42
Homo sapiens
Biosample type
31
tissue
11
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
42
AMP
Genome assembly (visualization)
42
GRCh38
32
hg19
Lab
42
AMP-T2D consortium
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
42 results
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DNase-seq
ChIP-seq
tissue
brain
14
coronary artery
2
frontal cortex
2
tibial artery
2
Ammon's horn
1
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primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
astrocyte of the hippocampus
1
brain pericyte
1
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