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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
37
DNase-seq
1
snATAC-seq
Assay category
84
DNA accessibility
73
DNA binding
67
Transcription
6
3D chromatin structure
6
DNA methylation
Date released
35
February, 2023
35
June, 2019
8
February, 2021
3
October, 2019
1
January, 2018
1
July, 2019
1
May, 2022
Available data
82
bed narrowPeak
47
bam
40
bigWig
38
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
37
bigBed narrowPeak
1
txt
Organism
84
Homo sapiens
Biosample type
75
tissue
8
cell line
1
primary cell
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
84
AMP
Genome assembly (visualization)
82
GRCh38
49
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
84 results
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ATAC-seq
DNase-seq
snATAC-seq
tissue
coronary artery
36
2
muscle of arm
17
muscle of leg
13
tibial artery
1
2
skeletal muscle tissue
1
1
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cell line
smooth muscle cell of the coronary artery
8
primary cell
skeletal muscle cell
1
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