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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
237
histone
237
histone modification
122
broad histone mark
115
narrow histone mark
35
control
10
RNA binding protein
10
transcription factor
chromatin remodeller
Date released
4
June, 2019
3
November, 2017
1
August, 2017
1
May, 2019
Available data
9
bam
9
bed narrowPeak
9
bigBed narrowPeak
9
bigWig
4
bed broadPeak
4
bigBed broadPeak
4
fastq
Organism
9
Homo sapiens
Biosample type
331
cell line
92
tissue
46
in vitro differentiated cells
9
primary cell
Organ
5
epithelium
3
brain
2
kidney
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
heart
Project
9
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
target.investigated_as!
nucleotide modification
chromatin remodeller
files.file_type!
bedpe
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
skeletal muscle myoblast
1
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