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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
11
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
narrow histone mark
Date released
9
November, 2018
December, 2018
5
January, 2019
1
March, 2020
1
October, 2017
Available data
15
bam
15
fastq
11
bigWig
9
bed narrowPeak
8
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
868
pancreas
730
liver
651
connective tissue
479
adipose tissue
472
epithelium
353
heart
339
kidney
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
58
eye
41
blood
41
bodily fluid
35
nerve
29
embryo
20
lung
18
ureter
16
skeleton
16
spleen
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
11
GRCh38
9
hg19
Lab
16
AMP-T2D consortium
target.investigated_as!
nucleotide modification
narrow histone mark
month_released!
December, 2018
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
11
2
1
1
1
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