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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
pCHi-C
4
total RNA-seq
2
ATAC-seq
1
ChIP-seq
Assay category
4
Transcription
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
313
November, 2017
96
February, 2021
61
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
15
March, 2020
6
February, 2023
6
November, 2020
4
March, 2023
3
December, 2017
2
January, 2018
1
May, 2020
1
October, 2022
Available data
13
tsv
7
bigWig
5
bam
1
bed narrowPeak
Organism
15
Homo sapiens
Biosample type
40
tissue
11
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
5
epithelium
5
pancreas
2
kidney
1
connective tissue
1
mammary gland
Project
12
AMP
3
T1D
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
target.investigated_as!
other context
BIOSAMPLE
ASSAY
15 results
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pCHi-C
total RNA-seq
ATAC-seq
ChIP-seq
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
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