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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
4
Hi-C
Assay category
64
DNA accessibility
4
3D chromatin structure
Date released
64
August, 2021
4
July, 2019
October, 2019
Available data
3137
bam
2957
bigWig
1623
bed narrowPeak
1584
tsv
1353
fastq
967
bigBed narrowPeak
349
tagAlign
312
bed broadPeak
275
bigBed broadPeak
265
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
68
Homo sapiens
Biosample type
64
tissue
4
primary cell
Organ
64
kidney
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
68
AMP
Genome assembly (visualization)
64
GRCh38
4
hg19
Lab
64
Katalin Susztak, Upenn
4
AMP-T2D consortium
target.investigated_as!
other context
month_released!
October, 2019
BIOSAMPLE
ASSAY
68 results
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ATAC-seq
Hi-C
tissue
kidney
64
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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