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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
11
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
histone
6
histone modification
6
transcription factor
4
broad histone mark
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
6
November, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
15
bam
15
fastq
7
bigWig
5
bed narrowPeak
4
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
788
pancreas
687
liver
606
connective tissue
459
adipose tissue
424
epithelium
324
kidney
296
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
68
blood
68
bodily fluid
63
musculature of body
58
eye
25
embryo
20
lung
19
nerve
18
ureter
16
skeleton
16
spleen
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
7
GRCh38
5
hg19
Lab
16
AMP-T2D consortium
target.investigated_as!
other context
histone
month_released!
August, 2020
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
11
2
1
1
1
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