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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
60
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
other context
3
other post-translational modification
Date released
551
February, 2021
332
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
77
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
85
fastq
84
bam
77
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
77
Homo sapiens
Biosample type
57
cell line
20
tissue
Organ
52
liver
12
blood
12
bodily fluid
7
pancreas
3
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
77
AMP
Genome assembly (visualization)
76
GRCh38
68
hg19
Lab
77
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
other context
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
44
1
GM12878
12
tissue
liver
4
2
body of pancreas
2
2
pancreas
2
1
spleen
1
2
brain
2
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