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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ATAC-seq
Assay category
71
DNA accessibility
Date released
64
August, 2021
4
February, 2021
3
February, 2023
Available data
2945
bam
2739
bigWig
1799
bed narrowPeak
1309
fastq
1199
tsv
1027
bigBed narrowPeak
390
tagAlign
318
bed broadPeak
282
bigBed broadPeak
267
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
71
Homo sapiens
Biosample type
64
tissue
7
in vitro differentiated cells
Organ
64
kidney
4
connective tissue
Project
71
AMP
Genome assembly (visualization)
64
GRCh38
7
hg19
Lab
64
Katalin Susztak, Upenn
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
target.investigated_as!
other context
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
71 results
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ATAC-seq
tissue
kidney
64
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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