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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
WGBS
5
RRBS
4
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
89
Transcription
9
DNA accessibility
5
DNA methylation
Date released
698
February, 2021
263
August, 2021
234
May, 2021
205
February, 2023
185
June, 2019
168
July, 2018
147
May, 2020
119
May, 2022
103
August, 2017
87
July, 2019
70
October, 2019
59
September, 2020
58
March, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
24
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
8
January, 2018
8
November, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
Available data
100
fastq
98
bam
98
bigWig
89
tsv
9
bed narrowPeak
9
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
103
Homo sapiens
Biosample type
96
tissue
6
primary cell
1
in vitro differentiated cells
Organ
94
pancreas
4
musculature of body
3
epithelium
liver
2
connective tissue
1
adipose tissue
Project
103
AMP
Genome assembly (visualization)
101
hg19
95
GRCh38
Lab
103
AMP-T2D consortium
target.investigated_as!
other context
organ_slims!
liver
assay_title!
WGBS
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
103 results
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Clear Filters
total RNA-seq
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
skeletal muscle tissue
4
subcutaneous adipose tissue
1
primary cell
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
1
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