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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
26
total RNA-seq
14
ATAC-seq
4
DNase-seq
Assay category
32
DNA binding
26
Transcription
18
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
76
bam
76
bigWig
72
fastq
50
bed narrowPeak
26
tsv
18
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
76
Homo sapiens
Biosample type
72
primary cell
4
tissue
Organ
81
epithelium
81
kidney
76
pancreas
43
musculature of body
35
heart
32
limb
30
brain
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
76
AMP
Genome assembly (visualization)
76
GRCh38
74
hg19
Lab
76
AMP-T2D consortium
Audit category:
32
missing controlled_by
target.investigated_as!
other context
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
tissue
body of pancreas
2
pancreas
2
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