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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
9
DNA binding
2
DNA accessibility
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
3
December, 2018
1
March, 2020
1
November, 2018
1
October, 2017
Available data
11
bam
11
bed narrowPeak
11
bigWig
11
fastq
10
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
842
pancreas
676
liver
643
connective tissue
461
adipose tissue
447
epithelium
365
heart
342
kidney
255
brain
212
vasculature
207
blood vessel
159
bone element
132
artery
104
limb
89
musculature of body
63
blood
63
bodily fluid
60
eye
32
nerve
30
embryo
20
lung
20
vein
18
ureter
16
skeleton
12
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
12
AMP-T2D consortium
target.investigated_as!
other context
control
assay_title!
WGBS
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
9
1
1
1
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