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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
Assay category
13
DNA binding
Target of assay
47
transcription factor
23
histone
23
histone modification
13
narrow histone mark
10
broad histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
other post-translational modification
Date released
15
August, 2017
13
November, 2017
1
October, 2017
Available data
30
bigWig
29
bam
29
bed narrowPeak
28
bigBed narrowPeak
26
tagAlign
13
bed broadPeak
10
fastq
9
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
6
cell line
4
tissue
3
primary cell
Organ
7
brain
6
liver
2
epithelium
2
vasculature
1
blood vessel
Project
13
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
5
inconsistent control read length
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
cell line
HepG2
6
tissue
caudate nucleus
1
cingulate gyrus
1
middle frontal area 46
1
substantia nigra
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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