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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
10
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
December, 2018
7
January, 2019
6
November, 2018
1
March, 2020
1
October, 2017
Available data
14
bam
14
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
946
pancreas
788
liver
684
connective tissue
524
epithelium
491
adipose tissue
354
kidney
353
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
43
nerve
42
blood
42
bodily fluid
37
embryo
22
vein
20
lung
18
ureter
16
skeleton
15
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
15
AMP-T2D consortium
target.investigated_as!
other post-translational modification
month_released!
December, 2018
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
10
2
1
1
1
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