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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
28
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
91
DNA binding
29
Transcription
14
DNA accessibility
Target of assay
62
histone
62
histone modification
36
broad histone mark
29
control
26
narrow histone mark
transcription factor
11
RNA binding protein
Date released
702
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
284
October, 2019
205
February, 2023
200
May, 2022
178
August, 2021
168
July, 2018
162
November, 2017
134
June, 2019
111
May, 2019
97
July, 2019
73
September, 2018
62
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
April, 2019
52
December, 2017
49
April, 2018
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2018
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
133
bam
118
fastq
104
bigWig
76
bed narrowPeak
44
bigBed narrowPeak
28
tsv
1
csv
Organism
134
Homo sapiens
Biosample type
75
primary cell
59
tissue
Organ
115
pancreas
63
epithelium
18
adipose tissue
18
connective tissue
Project
134
AMP
Genome assembly (visualization)
104
GRCh38
104
hg19
Lab
134
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
target.investigated_as!
other post-translational modification
transcription factor
organ_slims!
kidney
BIOSAMPLE
ASSAY
134 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
3
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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tissue
body of pancreas
24
endocrine pancreas
16
subcutaneous adipose tissue
10
omental fat pad
8
pancreas
1
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