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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
Assay category
35
DNA methylation
Date released
22
July, 2019
7
November, 2018
6
August, 2017
Available data
2844
bam
2678
bigWig
1579
tsv
1189
bed narrowPeak
1174
fastq
672
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
35
Homo sapiens
Biosample type
24
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
recombinant protein
assay_slims!
DNA accessibility
organ_slims!
limb
BIOSAMPLE
ASSAY
35 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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