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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
98
total RNA-seq
18
ATAC-seq
Assay category
117
DNA binding
98
Transcription
18
DNA accessibility
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
3
control
Date released
170
May, 2021
45
May, 2020
18
May, 2022
Available data
215
bigWig
198
bam
132
bed narrowPeak
96
tsv
84
tagAlign
18
fastq
2
bed bed3+
Organism
233
Homo sapiens
Biosample type
215
primary cell
18
tissue
in vitro differentiated cells
Organ
18
pancreas
Project
180
T1D
53
AMP
Genome assembly (visualization)
233
hg19
180
GRCh38
Lab
2555
AMP-T2D consortium
233
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
17
Bing Ren, UCSD
3
Klaus Kaestner, Upenn
1
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
target.investigated_as!
recombinant protein
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
233 results
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ChIP-seq
total RNA-seq
ATAC-seq
primary cell
monocyte
84
53
CD8-positive, alpha-beta T cell
33
4
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 20 more…
tissue
islet of Langerhans
18
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