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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
52
histone
52
histone modification
27
narrow histone mark
25
broad histone mark
21
transcription factor
2
chromatin remodeller
1
RNA binding protein
recombinant protein
Date released
34
August, 2017
32
September, 2018
November, 2017
4
October, 2017
2
November, 2018
Available data
72
fastq
71
bam
71
bigWig
38
bed narrowPeak
14
bed bed3+
5
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
72
Homo sapiens
Biosample type
44
primary cell
26
tissue
in vitro differentiated cells
2
cell line
Organ
54
pancreas
21
epithelium
12
adipose tissue
12
connective tissue
4
brain
2
liver
Project
72
AMP
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
72
AMP-T2D consortium
Audit category:
72
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
target.investigated_as!
recombinant protein
month_released!
November, 2017
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
cell line
HepG2
2
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