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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
320
ChIP-seq
Assay category
320
DNA binding
Target of assay
234
transcription factor
77
histone
77
histone modification
71
control
recombinant protein
44
broad histone mark
33
narrow histone mark
32
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
399
May, 2021
395
August, 2017
341
May, 2020
320
November, 2017
319
August, 2021
307
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
83
December, 2017
80
April, 2019
75
October, 2018
73
September, 2018
67
November, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
306
bam
248
bigWig
238
fastq
229
bed narrowPeak
228
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
320
Homo sapiens
Biosample type
229
cell line
82
tissue
9
primary cell
Organ
229
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
320
AMP
Genome assembly (visualization)
198
GRCh38
196
hg19
Lab
320
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
320 results
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Clear Filters
ChIP-seq
cell line
HepG2
229
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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