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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
16
histone
16
histone modification
15
transcription factor
11
chromatin remodeller
8
broad histone mark
8
narrow histone mark
6
RNA binding protein
recombinant protein
Date released
18
November, 2017
6
August, 2017
5
November, 2018
1
October, 2018
Available data
55
bam
55
bigWig
55
fastq
53
bed narrowPeak
30
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
30
Homo sapiens
Biosample type
23
cell line
6
tissue
1
primary cell
Organ
24
liver
5
pancreas
Project
30
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
30
inconsistent control read length
9
inconsistent control run_type
3
inconsistent assembly
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
cell line
HepG2
23
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
skeletal muscle myoblast
1
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