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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
262
ChIP-seq
Assay category
262
DNA binding
Target of assay
244
transcription factor
recombinant protein
60
control
37
RNA binding protein
21
histone
21
histone modification
15
chromatin remodeller
12
narrow histone mark
9
broad histone mark
2
other context
2
other post-translational modification
Date released
707
February, 2021
326
August, 2017
309
May, 2021
295
August, 2021
291
May, 2020
262
November, 2017
258
October, 2019
218
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
72
November, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
9
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
326
bam
268
bigWig
258
fastq
247
bed narrowPeak
246
bigBed narrowPeak
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
262
Homo sapiens
Biosample type
237
cell line
16
tissue
9
primary cell
Organ
237
liver
25
brain
6
epithelium
6
vasculature
3
blood vessel
Project
262
AMP
Genome assembly (visualization)
198
hg19
160
GRCh38
Lab
262
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
9
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
files.file_type!
tagAlign
assay_title!
CRISPR genome editing followed by sgRNA sequencing
BIOSAMPLE
ASSAY
262 results
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Clear Filters
ChIP-seq
cell line
HepG2
237
tissue
layer of hippocampus
8
middle frontal area 46
6
cerebellum (Hemisphere)
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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