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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
268
ChIP-seq
Assay category
268
DNA binding
Target of assay
240
transcription factor
75
histone
75
histone modification
recombinant protein
45
broad histone mark
35
RNA binding protein
30
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
551
February, 2021
303
May, 2021
272
August, 2017
268
November, 2017
260
May, 2020
210
June, 2019
200
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
72
December, 2017
72
September, 2018
65
April, 2019
65
November, 2018
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
326
bam
268
bigWig
258
fastq
247
bed narrowPeak
246
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
268
Homo sapiens
Biosample type
202
cell line
57
tissue
9
primary cell
Organ
202
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
268
AMP
Genome assembly (visualization)
216
hg19
213
GRCh38
Lab
268
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
20
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
268 results
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Clear Filters
ChIP-seq
cell line
HepG2
202
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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