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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
41
WGBS
34
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
Assay category
60
Transcription
41
DNA methylation
22
DNA accessibility
Date released
688
February, 2021
359
August, 2017
349
May, 2021
285
October, 2019
241
May, 2020
232
August, 2021
214
June, 2019
168
July, 2018
162
November, 2017
123
May, 2022
115
May, 2019
102
February, 2023
102
July, 2019
74
April, 2019
61
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
34
November, 2019
25
February, 2020
24
November, 2018
19
April, 2020
16
January, 2019
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
7
December, 2018
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
95
zippedFastqFolder
7
txt
6
bam
6
fastq
1
bed bed3+
Organism
123
Homo sapiens
Biosample type
95
primary cell
28
tissue
Organ
47
pancreas
41
epithelium
20
liver
2
musculature of body
Project
95
HPAP
28
AMP
Genome assembly (visualization)
1
hg19
Lab
95
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
target.investigated_as!
transcription factor
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
123 results
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Clear Filters
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
pancreatic beta cell
16
tissue
liver
20
islet of Langerhans
6
skeletal muscle tissue
1
1
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