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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
9
total RNA-seq
2
Hi-C
2
STARR-seq
2
pCHi-C
1
whole genome sequencing assay
Assay category
65
DNA binding
Target of assay
60
control
transcription factor
7
RNA binding protein
5
histone
5
histone modification
3
narrow histone mark
2
broad histone mark
2
chromatin remodeller
1
recombinant protein
Date released
58
November, 2017
7
August, 2021
Available data
58
bam
58
fastq
18
bigWig
3
bed narrowPeak
3
tagAlign
2
bed broadPeak
2
bigBed broadPeak
Organism
65
Homo sapiens
Biosample type
65
cell line
Organ
65
liver
Project
65
AMP
Genome assembly (visualization)
34
hg19
GRCh38
Lab
58
AMP-T2D consortium
7
Bing Ren, UCSD
Audit category:
2
inconsistent control read length
target.investigated_as!
transcription factor
assembly!
GRCh38
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
cell line
HepG2
65
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