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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
total RNA-seq
86
ChIP-seq
13
ATAC-seq
Assay category
173
Transcription
86
DNA binding
13
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
transcription factor
Date released
563
February, 2021
272
May, 2021
207
May, 2020
206
June, 2019
203
August, 2017
200
October, 2019
164
July, 2018
105
August, 2021
91
May, 2019
79
July, 2019
76
November, 2017
72
September, 2018
59
April, 2019
56
November, 2019
49
April, 2018
35
December, 2017
35
February, 2023
32
October, 2018
31
February, 2018
16
March, 2020
16
November, 2018
14
October, 2017
12
January, 2019
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
December, 2018
2
March, 2019
1
March, 2023
Available data
272
bam
259
bigWig
173
tsv
99
bed narrowPeak
85
tagAlign
Organism
272
Homo sapiens
Biosample type
149
primary cell
80
in vitro differentiated cells
38
tissue
5
cell line
Organ
42
pancreas
8
epithelium
3
heart
2
embryo
1
connective tissue
Project
136
AMP
136
T1D
Genome assembly (visualization)
312
hg19
272
GRCh38
Lab
137
AMP-T2D consortium
135
Kyle Gaulton, UCSD
Audit category:
70
inconsistent ontology term
target.investigated_as!
transcription factor
assembly!
hg18
BIOSAMPLE
ASSAY
272 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
51
84
13
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
1
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