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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
23
ATAC-seq
14
total RNA-seq
Assay category
58
DNA binding
23
DNA accessibility
14
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
transcription factor
8
control
5
RNA binding protein
Date released
71
May, 2021
24
May, 2022
Available data
48
bed narrowPeak
40
bigWig
24
bam
24
fastq
6
txt
2
bed bed3+
Organism
95
Homo sapiens
Biosample type
35
in vitro differentiated cells
35
primary cell
25
tissue
Organ
25
pancreas
Project
T1D
95
AMP
Genome assembly (visualization)
58
hg19
Lab
3418
AMP-T2D consortium
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
95
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
27
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
target.investigated_as!
transcription factor
award.project!
T1D
BIOSAMPLE
ASSAY
95 results
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ChIP-seq
ATAC-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
25
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
islet of Langerhans
18
6
pancreas
1
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